gastropy.neuro.fmri.to_nifti

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gastropy.neuro.fmri.to_nifti#

gastropy.neuro.fmri.to_nifti(data_3d, affine)[source]#

Convert a 3D numpy array to a nibabel NIfTI image.

Parameters:
  • data_3d (np.ndarray) – 3D volume data.

  • affine (np.ndarray) – 4x4 affine transformation matrix.

Returns:

img – NIfTI image object (can be saved or passed to nilearn).

Return type:

nibabel.Nifti1Image